Database Name

Amount of Organisms

Address database website

antiCODEHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster.http://bioinfo.ibp.ac.cn/ANTIC...
ASRPArabidopsis Thaliana.http://asrp.cgrb.oregonstate.e...
BPSUnspecified.http://bps.rutgers.edu/
BRAliBaseSaccharomyces cerevisiae, Escherichia coli.http://projects.binf.ku.dk/pga...
CondorHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes.http://condor.nimr.mrc.ac.uk/
cre-siRNAChlamydomonas reinhardtii.http://cresirna.cmp.uea.ac.uk/...
CRWRattus norvegicus, Canis familiaris, Arabidopsis Thaliana, Dictyostelium discoideum, Glycine Max, Neurospora crassa and 1803 others.http://www.rna.ccbb.utexas.edu...
CSRDBZea mays, Ozyra sativa, Acinetobacter baumannii ACICU, Corynebacterium diphtheriae HC02, Dehalococcoides mccartyi GT, Flavobacterium psychrophilum JIP02/86.http://sundarlab.ucdavis.edu/s...
dbDEMCHomo sapiens.http://159.226.118.44/dbDEMC/
deepBaseHomo sapiens, Mus musculus, Gallus gallus, Ciona intestinalis, Drosophila melanogaster, Caenorhabditis elegans.http://deepbase.sysu.edu.cn/
doRiNAHomo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans.http://dorina.mdc-berlin.de
ExprTargetDBHomo sapiens.http://www.scandb.org/apps/mic...
fRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 37068 others.http://www.ncrna.org/frnadb
HOCTARdbHomo sapiens.http://hoctar.tigem.it/
HuSiDaHomo sapiens.http://itb.biologie.hu-berlin....
IGDB.NSCLCHomo sapiens.http://igdb.nsclc.ibms.sinica....
LNCipediaHomo sapiens.http://www.lncipedia.org
lncRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus and 55 others.http://lncrnadb.com/
lncRNAdiseaseHomo sapiens.http://202.38.126.151/hmdd/htm...
lncRNomeHomo sapiens.http://genome.igib.res.in/lncR...
MeRNAUnspecified.http://merna.lbl.gov/
mESAdbHomo sapiens, Mus musculus, Danio rerio.http://konulab.fen.bilkent.edu...
MicroPCArabidopsis Thaliana, Brassica rapa, Glycine Max, Lycopersicon esculentum, Medicago truncatula, Oryza sativa and 121 others.http://konulab.fen.bilkent.edu...
microPIRHomo sapiens.http://www4a.biotec.or.th/micr...
microRNA.orgHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans.http://www.microrna.org/
microTranspoGeneHomo sapiens, Mus musculus, Danio rerio, Caenorhabditis elegans.http://transpogene.tau.ac.il/m...
mimiRNAHomo sapiens.http://mimirna.centenary.org.a...
miRandolaHomo sapiens.http://atlas.dmi.unict.it/mira...
miRĂ²Homo sapiens.http://ferrolab.dmi.unict.it/m...
miRBaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 151 others.http://www.mirbase.org/
miRCancerHomo sapiens.http://mircancer.ecu.edu/
miRDB Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus.http://www.mirdb.org/
miRecordsHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus.http://mirecords.biolead.org/
mirEXArabidopsis Thaliana.http://bioinfo.amu.edu.pl/mire...
miRFANsArabidopsis Thaliana, Oryza sativa, Cassava.http://www.cassava-genome.cn/m...
miRGatorHomo sapiens.http://mirgator.kobic.re.kr/
mirGenHomo sapiens, Mus musculus.http://www.microrna.gr/mirgen/
miRHrtMus musculus, Danio rerio, Gallus gallus.http://sysbio.suda.edu.cn/mirh...
miRNA Body MapHomo sapiens, Rattus norvegicus, Mus musculus.http://www.mirnabodymap.org
miRNAMapHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes.http://mirnamap.mbc.nctu.edu.t...
miRNeyeMus musculus.http://mirneye.tigem.it/
miRTarBaseHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster and 11 others.http://mirtarbase.mbc.nctu.edu...
miRWalkHomo sapiens, Rattus norvegicus, Mus musculus.http://www.ma.uni-heidelberg.d...
miSolRNASolanum lycopersicum.http://www.misolrna.org/
miTALOSHomo sapiens, Mus musculus.http://mips.helmholtz-muenchen...
NATsDBHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus.http://natsdb.cbi.pku.edu.cn/
ncRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus, Drosophila melanogaster and 84 others.http://ncrnadb.trna.ibch.pozna...
ncRNAimprintHomo sapiens, Rattus norvegicus, Mus musculus, Macaca mulatta, Bos Taurus, Ovis aries.http://rnaqueen.sysu.edu.cn/nc...
NNDBUnspecified.http://rna.urmc.rochester.edu/...
NONCODEHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 908 others.http://www.noncode.org/
NPInterHomo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans, Saccharomyces cerevisiae, Escherichia coli.http://www.bioinfo.org.cn/NPIn...
NREDHomo sapiens, Mus musculus.http://jsm-research.imb.uq.edu...
PatroclesHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus, Bos Taurus.http://www.patrocles.org/
Pharmaco-miRUnspecified.http://www.pharmaco-mir.org/
PhenomiR Homo sapiens.http://mips.helmholtz-muenchen...
PlantNATsDBArabidopsis Thaliana, Glycine Max, Medicago truncatula, Vitis vinifera, Ectocarpus siliculosus, Chlamydomonas reinhardtii and 63 others.http://bis.zju.edu.cn/pnatdb/
PlncdbArabidopsis Thaliana.http://chualab.rockefeller.edu...
PmiRKBArabidopsis Thaliana, Oryza sativa.http://bis.zju.edu.cn/pmirkb/
PMRDArabidopsis Thaliana, Brassica rapa, Dictyostelium discoideum, Glycine Max, Medicago truncatula, Oryza sativa and 121 others.http://bioinformatics.cau.edu....
PolymiRTSHomo sapiens, Mus musculus.http://compbio.uthsc.edu/miRSN...
PseudoBaseHomo sapiens, Mus musculus, Bos Taurus, Saccharomyces cerevisiae, Bombyx mori, Escherichia coli and 121 others.http://pseudobaseplusplus.utep...
RfamArabidopsis Thaliana, Brassica rapa, Glycine Max, Medicago truncatula, Oryza sativa, Vitis vinifera and 270 others.http://rfam.sanger.ac.uk/
RNA FRABASEUnspecified.http://rnafrabase.ibch.poznan....
RNA STRANDHomo sapiens, Canis familiaris, Mus musculus, Bos Taurus, Oryza sativa, Saccharomyces cerevisiae and 48 others.http://www.rnasoft.ca/strand/
RNAiAtlasHomo sapiens.http://www.rnaiatlas.ethz.ch
RNAJunctionUnspecified.http://rnajunction.abcc.ncifcr...
S-MEDHomo sapiens.http://www.oncomir.umn.edu/SME...
SCORUnspecified.http://scor.berkeley.edu/
SiLoDbArabidopsis Thaliana, Medicago truncatula, Solanum lycopersicum, Ozyra sativa, Chamydomonas reinhardtii.http://silodb.cmp.uea.ac.uk/
siRecordsHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus, Macaca mulatta and 11 others.http://sirecords.biolead.org/
smiRNAdbHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Caenorhabditis elegans.http://www.mirz.unibas.ch/clon...
snoRNA-LBME-dbHomo sapiens.http://www-snorna.biotoul.fr/
snoRNP databaseUnspecified.http://www.evolveathome.com/sn...
sRNAdbUnspecified.http://bioinfo.mikrobio.med.un...
sRNATarBaseEscherichia coli, Azobacter vinelandii, Bacillus subtilis, Listeria monocytogenes, Neisseria meningitides, Prochlorococcus marinus and 10 others.http://ccb.bmi.ac.cn/srnatarba...
starBaseHomo sapiens, Mus musculus, Caenorhabditis elegans, Arabidopsis Thaliana, Oryza sativa, Vitis vinifera.http://starbase.sysu.edu.cn/
TarBaseHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Caenorhabditis elegans.http://diana.cslab.ece.ntua.gr...
Telomerase DatabaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 252 others.http://telomerase.asu.edu/
TFCONESHomo sapiens, Mus musculus, Takifugu rubripes.http://tfcones.fugu-sg.org/
The Functional lncRNA DatabaseHomo sapiens, Rattus norvegicus, Mus musculus.http://valadkhanlab.org/databa...
The MIT/ICBP siRNA DatabaseHomo sapiens, Mus musculus.http://web.mit.edu/sirna/
The Tomato small RNA DatabaseSolanum lycopersicum, Solanum pennellii, Solanum lycopersicum x S. pennellii.http://ted.bti.cornell.edu/
The UCSC Genome Browser databaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Macaca mulatta, Bos Taurus and 40 others.http://genome.ucsc.edu/
Trans-SAMapHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus.http://trans.cbi.pku.edu.cn/
TRiPDrosophila melanogaster.http://www.flyrnai.org/TRiP-HO...
VIRsiRNAdbViruses.http://crdd.osdd.net/servers/v...
YM500Homo sapiens, Mus musculus.http://ngs.ym.edu.tw/ym500/
ZooMirHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 80 others.http://insr.ibms.sinica.edu.tw...
Oct. 2014: Release 2.0 - READ ME and Download NRDR 2.0 - (version history)