Database Name

Amount of Organisms

Address database website

antiCODEHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster.http://bioinfo.ibp.ac.cn/ANTIC...
ASRPArabidopsis Thaliana.http://asrp.cgrb.oregonstate.e...
CircuitsDBHomo sapiens, Mus musculus.http://biocluster.di.unito.it/...
CoGemiRHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 32 others.http://cogemir.tigem.it/
CondorHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes.http://condor.nimr.mrc.ac.uk/
cre-siRNAChlamydomonas reinhardtii.http://cresirna.cmp.uea.ac.uk/...
CRWRattus norvegicus, Canis familiaris, Arabidopsis Thaliana, Dictyostelium discoideum, Glycine Max, Neurospora crassa and 1803 others.http://www.rna.ccbb.utexas.edu...
CSRDBZea mays, Ozyra sativa, Acinetobacter baumannii ACICU, Corynebacterium diphtheriae HC02, Dehalococcoides mccartyi GT, Flavobacterium psychrophilum JIP02/86.http://sundarlab.ucdavis.edu/s...
deepBaseHomo sapiens, Mus musculus, Gallus gallus, Ciona intestinalis, Drosophila melanogaster, Caenorhabditis elegans.http://deepbase.sysu.edu.cn/
dPOREHomo sapiens.http://apps.sanbi.ac.za/dpore/
fRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 37068 others.http://www.ncrna.org/frnadb
GISSDPseudomonas stutzeri A1501, Rhizobium etli CIAT 652, Buchnera aphidicola Sg, Chloroflexus sp. Y-400-fl, Streptococcus pyogenes MGAS10750, Leptotrichia sp. oral taxon 212 and 16 others.http://www.rna.whu.edu.cn/giss...
GtRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 4263 others.http://gtrnadb.ucsc.edu/
lncRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus and 55 others.http://lncrnadb.com/
mESAdbHomo sapiens, Mus musculus, Danio rerio.http://konulab.fen.bilkent.edu...
Methylation Guide snoRNAArabidopsis Thaliana, Saccharomyces cerevisiae, Sulfolobus solfataricus, Sulfolobus acidocaldarius, Aeropurum pernix, Methanococcus jannaschii.http://lowelab.ucsc.edu/snoRNA...
MicroPCArabidopsis Thaliana, Brassica rapa, Glycine Max, Lycopersicon esculentum, Medicago truncatula, Oryza sativa and 121 others.http://konulab.fen.bilkent.edu...
microTranspoGeneHomo sapiens, Mus musculus, Danio rerio, Caenorhabditis elegans.http://transpogene.tau.ac.il/m...
miRĂ²Homo sapiens.http://ferrolab.dmi.unict.it/m...
miRBaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 151 others.http://www.mirbase.org/
miRDB Homo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus.http://www.mirdb.org/
mirGenHomo sapiens, Mus musculus.http://www.microrna.gr/mirgen/
miRHrtMus musculus, Danio rerio, Gallus gallus.http://sysbio.suda.edu.cn/mirh...
miRNAMapHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes.http://mirnamap.mbc.nctu.edu.t...
miRNApathHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus.http://lgmb.fmrp.usp.br/mirnap...
miRNeyeMus musculus.http://mirneye.tigem.it/
miROrthoHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 40 others.http://cegg.unige.ch/mirortho/
miRTarBaseHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Drosophila melanogaster and 11 others.http://mirtarbase.mbc.nctu.edu...
miRvarHomo sapiens.http://genome.igib.res.in/mirl...
miSolRNASolanum lycopersicum.http://www.misolrna.org/
miTALOSHomo sapiens, Mus musculus.http://mips.helmholtz-muenchen...
Mobile Group II IntronsArabidopsis Thaliana, Glycine Max, Neurospora crassa, Saccharomyces cerevisiae, Zea mays, Kluyveromyces lactis and 22 others.http://www.fp.ucalgary.ca/grou...
ncRNAdbHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Gallus gallus, Drosophila melanogaster and 84 others.http://ncrnadb.trna.ibch.pozna...
ncRNAimprintHomo sapiens, Rattus norvegicus, Mus musculus, Macaca mulatta, Bos Taurus, Ovis aries.http://rnaqueen.sysu.edu.cn/nc...
NONCODEHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 908 others.http://www.noncode.org/
NPInterHomo sapiens, Mus musculus, Drosophila melanogaster, Caenorhabditis elegans, Saccharomyces cerevisiae, Escherichia coli.http://www.bioinfo.org.cn/NPIn...
NREDHomo sapiens, Mus musculus.http://jsm-research.imb.uq.edu...
piRNABankHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Ornithorhynchus anatinus.http://pirnabank.ibab.ac.in/
Plant snoRNA databaseArabidopsis Thaliana, Glycine Max, Lycopersicon esculentum, Medicago truncatula, Chlamydomonas reinhardtii, Pinus taeda and 12 others.http://bioinf.scri.sari.ac.uk/...
PlncdbArabidopsis Thaliana.http://chualab.rockefeller.edu...
PmiRKBArabidopsis Thaliana, Oryza sativa.http://bis.zju.edu.cn/pmirkb/
PMRDArabidopsis Thaliana, Brassica rapa, Dictyostelium discoideum, Glycine Max, Medicago truncatula, Oryza sativa and 121 others.http://bioinformatics.cau.edu....
PseudoBaseHomo sapiens, Mus musculus, Bos Taurus, Saccharomyces cerevisiae, Bombyx mori, Escherichia coli and 121 others.http://pseudobaseplusplus.utep...
RepTarHomo sapiens, Mus musculus, Human EBV virus, Human HCMV virus, Human KSHV virus, Mouse MCMV virus.http://bioinformatics.ekmd.huj...
RfamArabidopsis Thaliana, Brassica rapa, Glycine Max, Medicago truncatula, Oryza sativa, Vitis vinifera and 270 others.http://rfam.sanger.ac.uk/
RNA FRABASEUnspecified.http://rnafrabase.ibch.poznan....
RNAJunctionUnspecified.http://rnajunction.abcc.ncifcr...
S-MEDHomo sapiens.http://www.oncomir.umn.edu/SME...
SiLoDbArabidopsis Thaliana, Medicago truncatula, Solanum lycopersicum, Ozyra sativa, Chamydomonas reinhardtii.http://silodb.cmp.uea.ac.uk/
siRNAdbHomo sapiens.http://sirna.sbc.su.se/
smiRNAdbHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Caenorhabditis elegans.http://www.mirz.unibas.ch/clon...
Sno/scaRNAbaseDanio rerio, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis Thaliana, Bos Taurus and 23 others.http://gene.fudan.sh.cn/snoRNA...
snoRNA-LBME-dbHomo sapiens.http://www-snorna.biotoul.fr/
snoRNP databaseUnspecified.http://www.evolveathome.com/sn...
sRNAmapEscherichia coli, Pectobacterium atrosepticum, Photorhabdus luminescens, Salmonella species, Serratia species, Shigella species and 9 others.http://srnamap.mbc.nctu.edu.tw...
sRNATarBaseEscherichia coli, Azobacter vinelandii, Bacillus subtilis, Listeria monocytogenes, Neisseria meningitides, Prochlorococcus marinus and 10 others.http://ccb.bmi.ac.cn/srnatarba...
SRPDBHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Gallus gallus, Ciona intestinalis and 539 others.http://rnp.uthscsa.edu/rnp/SRP...
starBaseHomo sapiens, Mus musculus, Caenorhabditis elegans, Arabidopsis Thaliana, Oryza sativa, Vitis vinifera.http://starbase.sysu.edu.cn/
TarBaseHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Drosophila melanogaster, Caenorhabditis elegans.http://diana.cslab.ece.ntua.gr...
Telomerase DatabaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 252 others.http://telomerase.asu.edu/
The MIT/ICBP siRNA DatabaseHomo sapiens, Mus musculus.http://web.mit.edu/sirna/
The ribonuclease P databaseHomo sapiens, Rattus norvegicus, Mus musculus, Danio rerio, Macaca mulatta, Pan troglodytes and 252 others.http://www.mbio.ncsu.edu/rnase...
The Tomato small RNA DatabaseSolanum lycopersicum, Solanum pennellii, Solanum lycopersicum x S. pennellii.http://ted.bti.cornell.edu/
The UCSC Genome Browser databaseHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Macaca mulatta, Bos Taurus and 40 others.http://genome.ucsc.edu/
tmRNA Website Reclinomonas americana , Phytophthora citricola , Phytophthora capsici , Phytophthora fragariae , Saprolegnia ferax , Herbaspirillum seropedicae SmR1 and 1594 others.http://bioinformatics.sandia.g...
Trans-SAMapHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Gallus gallus.http://trans.cbi.pku.edu.cn/
TRiPDrosophila melanogaster.http://www.flyrnai.org/TRiP-HO...
tRNAdbProchlorococcus marinus, Moloney murine leukemia virus, Bacillus thuringiensis serovar konkukian str. 97-27, Pyrobaculum aerophilum str. IM2, Fusobacterium nucleatum subsp. nucleatum ATCC 25586, Symbiobacterium thermophilum IAM 14863 and 157 others.http://trnadb.bioinf.uni-leipz...
U12DBHomo sapiens, Rattus norvegicus, Canis familiaris, Mus musculus, Danio rerio, Takifugu rubripes and 14 others.http://genome.imim.es/datasets...
VIRsiRNAdbViruses.http://crdd.osdd.net/servers/v...
Yeast snoRNA databaseSaccharomyces cerevisiae.http://people.biochem.umass.ed...
Oct. 2014: Release 2.0 - READ ME and Download NRDR 2.0 - (version history)